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Parfii-bot 57b9475e50 feat(stream-c): kei-sage substrate — walk atoms/*.md + wikilink graph 
Extends kei-sage with substrate-atom indexing layer per locked schema
§Graph / discovery contract.

New modules (all ≤ 200 LOC, Constructor Pattern):
- src/atom_parse.rs — frontmatter splitter, wikilink parser, id splitter
- src/atoms.rs — AtomKind + FromStr, AtomRecord, discover_atoms, resolve_wikilinks
- src/atom_index.rs — persists atoms as Units + atom_related edges into existing Store
- src/atom_cli.rs — 4 subcommand handlers

New CLI subcommands (default root ~/.claude/agents/_primitives/_rust):
- atoms-discover — walks atoms/*.md, prints table
- atoms-rank — PageRank over wikilink edges (composes w/ existing vault)
- atoms-related <atom-id> — BFS from atom
- atoms-search <query> — FTS over frontmatter + body

Tolerant scan: invalid frontmatter → stderr warn + continue (never abort).
[[rules/...]] wikilinks filtered at edge resolution per scope (rules
integration deferred to follow-up).

Tests: 9 unit + 6 integration smoke + 8 pre-existing = 23/23 green.
Zero regression. Single new dep: serde_yaml 0.9.

Stream C of substrate v1 parallel build.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-23 00:09:57 +08:00
..
firewall-diff feat(primitives): 2 Rust verification cubes 2026-04-21 21:00:01 +08:00
kei-artifact Merge feat/v0.16.1-polish — dynamic schema + mode matrix Phase 3.6 2026-04-22 15:13:05 +08:00
kei-auth fix(kei-auth): remove --key CLI flag (F12 HIGH — /proc/cmdline leak) 2026-04-22 13:36:17 +08:00
kei-changelog feat(primitives): kei-docs-scaffold shell + kei-changelog Rust 2026-04-21 21:01:28 +08:00
kei-chat-store chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-conflict-scan feat(primitives): 4 Rust crates for deep-sleep — conflict-scan, refactor-engine, graph-check, store 2026-04-22 08:28:22 +08:00
kei-content-store chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-crossdomain chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-curator chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-graph-check feat(primitives): 4 Rust crates for deep-sleep — conflict-scan, refactor-engine, graph-check, store 2026-04-22 08:28:22 +08:00
kei-ledger feat(primitives): kei-ledger Rust SQLite agent ledger 2026-04-21 20:52:20 +08:00
kei-memory feat(primitives): kei-memory Rust crate — offline session analyzer (Genesis-clean) 2026-04-22 00:50:04 +08:00
kei-migrate feat(primitives): kei-migrate Rust universal migration runner 2026-04-21 20:35:29 +08:00
kei-refactor-engine fix(kei-refactor-engine): retract 'git apply-ready' claim (F1 RELEASE BLOCKER) 2026-04-22 13:36:17 +08:00
kei-router chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-sage feat(stream-c): kei-sage substrate — walk atoms/*.md + wikilink graph 2026-04-23 00:09:57 +08:00
kei-search-core chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-social-store chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-store refactor(v0.22): kei-store AsyncBackend trait + shared tokio runtime (Track B) 2026-04-22 21:06:50 +08:00
kei-task chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
keisei fix(tests): repair 2 missing closing braces from v0.22 Track-A↔Track-C merge 2026-04-22 21:16:22 +08:00
mock-render refactor(mock-render): split main.rs 227 LOC into 4 cubes (F5a Constructor Pattern) 2026-04-22 13:36:17 +08:00
ssh-check feat(primitives): 2 Rust verification cubes 2026-04-21 21:00:01 +08:00
tokens-sync feat(primitives): 3 Rust cubes — mock-render, visual-diff, tokens-sync 2026-04-21 21:07:45 +08:00
visual-diff feat(primitives): 3 Rust cubes — mock-render, visual-diff, tokens-sync 2026-04-21 21:07:45 +08:00
.gitignore feat(primitives): 2 Rust verification cubes 2026-04-21 21:00:01 +08:00
Cargo.lock feat(stream-c): kei-sage substrate — walk atoms/*.md + wikilink graph 2026-04-23 00:09:57 +08:00
Cargo.toml fix(v0.19): audit hardening — 3 security HIGH + 3 critic HIGH + 2 critic MEDIUM 2026-04-22 16:36:11 +08:00