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Parfii-bot 0ea429054f feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 
## Wave 14 — 5 new primitives (44 crates total, 713 tests green)

All specs written as task.toml → passed through kei-agent-runtime prepare
→ composed prompts via capability fragments → Agent tool invocation.
First fully-dogfooded wave.

- kei-prune (9 tests): biological pruning. `candidates(idle_days)` +
  `mark_retired(id)` on sidecar `prune_retirements` table (agents.status
  CHECK precluded 'retired' value).
- kei-discover (8 tests): federated marketplace discovery stub. UNIQUE
  slug via custom migration + FTS5 on slug+description. Engine-native
  via kei-entity-store. Typed DuplicateSlug error.
- kei-brain-view (6-8 tests): stdout visualizer for ledger taxonomy
  graph + agent lineage. Tree / stats / lineage subcommands. NO_COLOR
  env respected. No kei-entity-store dep (direct rusqlite).
- kei-hibernate (6 tests): whole-brain tar.zst export/import. Manifest
  with sha256 per-file, version gate, safe_join on extract, dry-run
  mode. tar 0.4 + zstd 0.13.
- kei-ledger-sign (7 tests): ed25519 creator attestation. keygen / sign /
  verify CLI. Canonical message `dna|spec_sha|creator_id` with pipe
  rejection. chmod 600 on key storage (unix). Tamper-detection on load
  via pubkey re-derivation.

## Phase 2 cleanup shipped in same commit

- LOC splits: walk.rs 221→91 (path_safety.rs + wikilink.rs extracted),
  prepare.rs 228→199 (dead build_ledger_row removed, fn helpers split).
- Clippy pass: 6 warnings fixed (derivable_impls, manual_contains,
  type_complexity x2, doc_overindented_list_items x2) in
  kei-entity-store, kei-ledger, kei-spawn.
- DNA eprintln removed from kei-agent-runtime/src/dna.rs (stderr
  pollution from library parse).
- kei-pipe integrations: hot_reload.rs (kei-watch wrapper, sync API,
  50ms debounce) + scheduler_bridge.rs (kei-scheduler executor, shell
  exec documented). +6 tests.
- Workspace [workspace.dependencies] centralised: rusqlite/chrono/
  anyhow/thiserror/tempfile/toml — future crates opt in via
  `.workspace = true`. Existing pins preserved.

## Substrate dogfood verified

task.toml → `kei-agent-runtime prepare` → DNA + composed prompt from
capability fragments → Agent tool invocation. kei-spawn also tested
end-to-end (prompt.md written to tasks/<agent-id>/, ledger row created).

Verified: cargo check --workspace clean, 713 tests passing,
substrate_integration.sh ✓, hook_wiring_integration.sh ✓.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-23 17:19:25 +08:00
..
firewall-diff feat(primitives): 2 Rust verification cubes 2026-04-21 21:00:01 +08:00
kei-agent-runtime feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-artifact Merge feat/v0.16.1-polish — dynamic schema + mode matrix Phase 3.6 2026-04-22 15:13:05 +08:00
kei-atom-discovery feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-auth fix(kei-auth): remove --key CLI flag (F12 HIGH — /proc/cmdline leak) 2026-04-22 13:36:17 +08:00
kei-brain-view feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-cache feat(r2): new kei-cache crate — deterministic result cache 2026-04-23 05:55:13 +08:00
kei-capability feat(e2): kei-capability fork subcommand + lineage stamping 2026-04-23 10:21:45 +08:00
kei-changelog feat(primitives): kei-docs-scaffold shell + kei-changelog Rust 2026-04-21 21:01:28 +08:00
kei-chat-store feat(a): Store::open multi-schema — kei-chat-store sessions fully engine-owned 2026-04-23 14:27:15 +08:00
kei-conflict-scan feat(primitives): 4 Rust crates for deep-sleep — conflict-scan, refactor-engine, graph-check, store 2026-04-22 08:28:22 +08:00
kei-content-store feat(w12a): sister re-migration — content-store campaigns promoted to engine 2026-04-23 14:44:31 +08:00
kei-crossdomain feat(a): Store::open multi-schema — kei-chat-store sessions fully engine-owned 2026-04-23 14:27:15 +08:00
kei-curator chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-diff feat(wave13): kei-diff + kei-scheduler + kei-watch primitives 2026-04-23 15:51:42 +08:00
kei-discover feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-entity-store feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-forge feat(stream-f): kei-forge pure-Rust templating — eliminate shell-out 2026-04-23 01:21:00 +08:00
kei-graph-check feat(primitives): 4 Rust crates for deep-sleep — conflict-scan, refactor-engine, graph-check, store 2026-04-22 08:28:22 +08:00
kei-hibernate feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-ledger fix(ledger): DNA UNIQUE constraint + v5 migration (HIGH audit) 2026-04-23 15:45:43 +08:00
kei-ledger-sign feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-memory feat(primitives): kei-memory Rust crate — offline session analyzer (Genesis-clean) 2026-04-22 00:50:04 +08:00
kei-migrate feat(primitives): kei-migrate Rust universal migration runner 2026-04-21 20:35:29 +08:00
kei-pipe feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-provision fix(provision/b4): exec.rs redacts args + truncates stderr 2026-04-23 05:30:33 +08:00
kei-prune feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-refactor-engine fix(kei-refactor-engine): retract 'git apply-ready' claim (F1 RELEASE BLOCKER) 2026-04-22 13:36:17 +08:00
kei-replay feat(w9e): NEW kei-replay crate — reconstruct spawn from DNA 2026-04-23 13:34:16 +08:00
kei-router chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-runtime fix(p1-integration): validate.rs allows _schemas/fragments $ref + drop additionalProperties on fragment-composed atom schemas 2026-04-23 04:53:26 +08:00
kei-sage feat(a): Store::open multi-schema — kei-chat-store sessions fully engine-owned 2026-04-23 14:27:15 +08:00
kei-scheduler feat(wave13): kei-diff + kei-scheduler + kei-watch primitives 2026-04-23 15:51:42 +08:00
kei-search-core chore(rust): misc schema/main refactor in 8 crates (assorted CP splits) 2026-04-22 13:36:17 +08:00
kei-social-store feat(w12a): sister re-migration — content-store campaigns promoted to engine 2026-04-23 14:44:31 +08:00
kei-spawn feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
kei-store refactor(v0.22): kei-store AsyncBackend trait + shared tokio runtime (Track B) 2026-04-22 21:06:50 +08:00
kei-task feat(a): Store::open multi-schema — kei-chat-store sessions fully engine-owned 2026-04-23 14:27:15 +08:00
kei-watch feat(wave13): kei-diff + kei-scheduler + kei-watch primitives 2026-04-23 15:51:42 +08:00
keisei fix(tests): repair 2 missing closing braces from v0.22 Track-A↔Track-C merge 2026-04-22 21:16:22 +08:00
mock-render refactor(mock-render): split main.rs 227 LOC into 4 cubes (F5a Constructor Pattern) 2026-04-22 13:36:17 +08:00
ssh-check feat(primitives): 2 Rust verification cubes 2026-04-21 21:00:01 +08:00
tokens-sync feat(primitives): 3 Rust cubes — mock-render, visual-diff, tokens-sync 2026-04-21 21:07:45 +08:00
visual-diff feat(primitives): 3 Rust cubes — mock-render, visual-diff, tokens-sync 2026-04-21 21:07:45 +08:00
.gitignore feat(primitives): 2 Rust verification cubes 2026-04-21 21:00:01 +08:00
Cargo.lock feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00
Cargo.toml feat(wave14): 5 bio-inspired primitives + phase2 cleanup + substrate dogfood 2026-04-23 17:19:25 +08:00